STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4318ADP-ribosylglycohydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (376 aa)    
Predicted Functional Partners:
SPRI_4317
FO synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.733
SPRI_1349
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.691
SPRI_5479
Crystallin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.689
SPRI_2093
Crystallin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
      
 0.629
SPRI_0727
TIGR02452 family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.603
SPRI_5761
Crystallin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
0.587
SPRI_2268
Nitrogen regulatory protein P-II 1; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.575
SPRI_5481
Crystallin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.537
SPRI_1033
Appr-1-p processing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.479
SPRI_1398
Peptidoglycan-binding domain 1 containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.