Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SPRI_4416MFS transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (409 aa)    
Predicted Functional Partners:
SPRI_5559
Alkaline phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.608
SPRI_0683
TIGR03083 family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.576
SPRI_2072
Secreted glycosyl hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.534
SPRI_0593
APHP domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.502
SPRI_0511
Alpha-galactosidase family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.498
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
       0.482
SPRI_5561
TolB; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.482
SPRI_6540
N-acetyltransferase GCN5; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.477
SPRI_2367
ArsR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.474
SPRI_3870
Xaa-Pro aminopeptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
 
   
 0.471
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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