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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpSATP-dependent Clp protease adapter protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (98 aa)    
Predicted Functional Partners:
SPRI_4635
Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.937
SPRI_2147
Ferritin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
 
 0.870
SPRI_6843
DNA polymerase sliding clamp subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
 
 0.870
SPRI_2604
Peptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.859
clpP-3
Clp protease ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.834
SPRI_2427
Clp protease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.824
SPRI_3393
ATP-dependent Clp protease ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
  
 
 0.824
clpB
ATPase AAA; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.824
SPRI_6190
Peptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.804
SPRI_6822
Beta-lactamase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.804
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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