STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4713Decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
SPRI_4711
2-hydroxyacid dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.930
SPRI_4712
Decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    
0.915
SPRI_4710
Amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
 
     0.898
SPRI_4709
Protein With A Cyclophilin-like Fold; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.817
SPRI_6098
Maleate cis-trans isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.797
SPRI_4708
Amino acid ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.725
SPRI_4705
Glutamate ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.632
SPRI_5647
Multidrug DMT transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.464
SPRI_5153
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
      
 0.463
SPRI_4263
Oxidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
      
 0.418
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.