STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4848VWA domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (452 aa)    
Predicted Functional Partners:
SPRI_4847
Phosphopeptide-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.954
SPRI_4849
Serine/threonine protein phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.932
SPRI_4851
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.914
SPRI_4850
Serine/threonine protein kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.880
SPRI_5671
Magnesium chelatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.842
SPRI_4853
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.838
SPRI_1205
Protein serine/threonine phosphatase PrpC, regulation of stationary phase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.785
SPRI_4852
Sugar-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 
     0.730
SPRI_4235
Serine/threonine protein kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.694
SPRI_4854
Kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.567
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.