Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4978Carbohydrate kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
SPRI_1089
6-phospho-beta-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.885
SPRI_4979
Phosphate starvation protein PhoH; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.712
ybeY
16S rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.706
SPRI_4981
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.706
SPRI_4819
Myo-inositol catabolism protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.676
SPRI_4982
DNA-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.613
SPRI_4816
IolE protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.597
SPRI_4820
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
 
  
 0.583
SPRI_4974
Histidine triad (HIT) protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.582
priA
Phosphoribosyl isomerase; Involved in both the histidine and tryptophan biosynthetic pathways; Belongs to the HisA/HisF family.
  
    0.545
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.