STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_7172Ribokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
SPRI_7175
Adenosylhomocysteinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.845
SPRI_7173
Methionine synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.807
SPRI_7174
Putative 5,10-methylenetetrahydrofolate reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.797
SPRI_7171
S-adenosylmethionine synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.763
SPRI_7170
Alkanesulfonate monooxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.587
rbsD
Ribose ABC transporter; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.520
SPRI_4819
Myo-inositol catabolism protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.516
SPRI_4820
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
  
  
 0.505
priA
Phosphoribosyl isomerase; Involved in both the histidine and tryptophan biosynthetic pathways; Belongs to the HisA/HisF family.
  
    0.473
SPRI_6864
PTS lactose transporter subunit IIC; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.439
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.