STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbp2APenicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)    
Predicted Functional Partners:
rodA
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
 0.999
pknA
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.974
pknB
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.970
crgA
Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
   
 
 0.951
KHO30472.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
ppp
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.941
ftsI
Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.937
ftsW
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
 0.889
KHO30473.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.875
ftsQ
Cell division protein FtsQ; Essential cell division protein.
  
 
 0.869
Your Current Organism:
Corynebacterium minutissimum
NCBI taxonomy Id: 38301
Other names: ATCC 23348, C. minutissimum, CCUG 541, CIP 100652, DSM 20651, IFO 15361, JCM 9387, NBRC 15361, NCTC 10288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.