STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytR2LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)    
Predicted Functional Partners:
KHO30088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.793
wbbL
alpha-D-GlcNAc-diphosphoryl polyprenol, alpha-3-L-rhamnosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.769
glgC_2
GDP-mannose pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
KHO29976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
KHO29743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.677
KHO30087.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
KHO29915.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
lpqB
Lipoprotein LpqB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
lytR1
LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.571
KHO30119.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
Your Current Organism:
Corynebacterium minutissimum
NCBI taxonomy Id: 38301
Other names: ATCC 23348, C. minutissimum, CCUG 541, CIP 100652, DSM 20651, IFO 15361, JCM 9387, NBRC 15361, NCTC 10288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.