STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO29375.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
mntB_1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
psaA
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.961
KHO29556.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.951
mntO
Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.945
mntC
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.944
KHO29373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.933
mntA
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.907
sapD
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.857
KHO29377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
KHO29383.1
Threonine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.646
Your Current Organism:
Corynebacterium minutissimum
NCBI taxonomy Id: 38301
Other names: ATCC 23348, C. minutissimum, CCUG 541, CIP 100652, DSM 20651, IFO 15361, JCM 9387, NBRC 15361, NCTC 10288
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