STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL70786.1Von Willebrand factor type A domain-containing protein. (467 aa)    
Predicted Functional Partners:
SDL63227.1
Magnesium chelatase subunit I.
  
 0.981
SDL70821.1
Hemolysin, contains CBS domains.
       0.828
SDL70855.1
Hemolysin, contains CBS domains.
       0.828
SDM01149.1
Hypothetical protein.
   
  0.818
SDL70886.1
Superfamily II DNA and RNA helicase.
  
    0.755
SDL70910.1
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.675
SDL97153.1
Methyltransferase domain-containing protein.
   
 0.644
SDL70942.1
Uncharacterized domain 1-containing protein.
       0.576
SDL97635.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
   
  
 0.545
SDL66739.1
Putative thioredoxin.
   
    0.540
Your Current Organism:
Corynebacterium mycetoides
NCBI taxonomy Id: 38302
Other names: ATCC 43995, C. mycetoides, CCUG 27538, CIP 55.51, DSM 20632, IFO 15289, JCM 9388, NBRC 15289, NCTC 9864
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