node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL82407.1 | rplC | SAMN04488535_0899 | SAMN04488535_1897 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.848 |
SDL82407.1 | rplM | SAMN04488535_0899 | SAMN04488535_1953 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.853 |
SDL82407.1 | rplN | SAMN04488535_0899 | SAMN04488535_1910 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.863 |
SDL82407.1 | rplR | SAMN04488535_0899 | SAMN04488535_1925 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.849 |
SDL82407.1 | rplU | SAMN04488535_0899 | SAMN04488535_1116 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.853 |
SDL82407.1 | rpmC | SAMN04488535_0899 | SAMN04488535_1905 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.870 |
SDL82407.1 | rpmH | SAMN04488535_0899 | SAMN04488535_1615 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.849 |
SDL82407.1 | rpsC | SAMN04488535_0899 | SAMN04488535_1903 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.853 |
SDL82407.1 | rpsO | SAMN04488535_0899 | SAMN04488535_0788 | Macrolide transport system ATP-binding/permease protein. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.853 |
SDL82407.1 | rpsR | SAMN04488535_0899 | SAMN04488535_0113 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.861 |
rplC | SDL82407.1 | SAMN04488535_1897 | SAMN04488535_0899 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Macrolide transport system ATP-binding/permease protein. | 0.848 |
rplC | rplM | SAMN04488535_1897 | SAMN04488535_1953 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplN | SAMN04488535_1897 | SAMN04488535_1910 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
rplC | rplR | SAMN04488535_1897 | SAMN04488535_1925 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplC | rplU | SAMN04488535_1897 | SAMN04488535_1116 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
rplC | rpmC | SAMN04488535_1897 | SAMN04488535_1905 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rplC | rpmH | SAMN04488535_1897 | SAMN04488535_1615 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.999 |
rplC | rpsC | SAMN04488535_1897 | SAMN04488535_1903 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplC | rpsO | SAMN04488535_1897 | SAMN04488535_0788 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplC | rpsR | SAMN04488535_1897 | SAMN04488535_0113 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |