STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL90121.1Integral membrane protein. (117 aa)    
Predicted Functional Partners:
SDL90088.1
Hypothetical protein.
 
     0.848
SDL76313.1
Hypothetical protein.
  
    0.687
SDM15341.1
Putative copper resistance protein D.
  
     0.671
SDL89589.1
Putative copper resistance protein D.
  
     0.670
SDL84308.1
RDD family protein.
  
     0.661
SDM15317.1
Hypothetical protein.
  
    0.659
SDL83639.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
     0.617
SDM02680.1
Protein of unknown function.
  
     0.436
SDL84504.1
Sugar phosphate permease.
  
  
  0.409
SDL83607.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
     0.402
Your Current Organism:
Corynebacterium mycetoides
NCBI taxonomy Id: 38302
Other names: ATCC 43995, C. mycetoides, CCUG 27538, CIP 55.51, DSM 20632, IFO 15289, JCM 9388, NBRC 15289, NCTC 9864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.