STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL91192.1GAF domain-containing protein. (279 aa)    
Predicted Functional Partners:
SDM06099.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
   
 
 0.855
SDM07265.1
Hypothetical protein.
   
 0.834
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.780
SDM00159.1
Uncharacterized conserved protein, LabA/DUF88 family.
  
     0.745
SDL98801.1
Signal transduction histidine kinase.
  
 0.717
SDM14300.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
     0.661
SDM01229.1
Signal transduction histidine kinase.
   
 0.641
SDM16104.1
Two-component system, NarL family, sensor histidine kinase DesK.
   
 0.641
SDM11625.1
Signal transduction histidine kinase.
 
  0.640
SDL91221.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.579
Your Current Organism:
Corynebacterium mycetoides
NCBI taxonomy Id: 38302
Other names: ATCC 43995, C. mycetoides, CCUG 27538, CIP 55.51, DSM 20632, IFO 15289, JCM 9388, NBRC 15289, NCTC 9864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.