STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM08888.1Geranylgeranyl reductase family. (421 aa)    
Predicted Functional Partners:
SDL89001.1
Electron transfer flavoprotein beta subunit.
  
 
 0.895
SDM08915.1
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.844
SDL89036.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.747
SDL97421.1
Mycolic acid condensase.
  
 
 0.646
SDL61931.1
Phytoene/squalene synthetase.
  
 
 0.604
SDL83204.1
Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family.
 
 0.539
menA
1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.529
SDM13427.1
Fatty acid synthase, bacterial type.
 
   
 0.510
SDL61831.1
4-hydroxybenzoate polyprenyltransferase.
  
 
 0.494
SDL97635.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
  
 
 0.494
Your Current Organism:
Corynebacterium mycetoides
NCBI taxonomy Id: 38302
Other names: ATCC 43995, C. mycetoides, CCUG 27538, CIP 55.51, DSM 20632, IFO 15289, JCM 9388, NBRC 15289, NCTC 9864
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