STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM10733.1Hypothetical protein. (721 aa)    
Predicted Functional Partners:
SDM10702.1
Hypothetical protein.
 
    
0.818
SDM06877.1
Hypothetical protein.
 
   
 0.777
SDM07069.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.769
SDM05419.1
DNA polymerase-3 subunit epsilon.
  
     0.765
SDM10832.1
Type VII secretion protein EccB.
 
     0.742
SDL60366.1
Hypothetical protein.
  
     0.741
SDL72016.1
Hypothetical protein.
  
     0.740
SDL95224.1
Hypothetical protein.
  
     0.729
SDL57391.1
Trypsin.
  
     0.727
SDL59065.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.721
Your Current Organism:
Corynebacterium mycetoides
NCBI taxonomy Id: 38302
Other names: ATCC 43995, C. mycetoides, CCUG 27538, CIP 55.51, DSM 20632, IFO 15289, JCM 9388, NBRC 15289, NCTC 9864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.