SDM12445.1 protein (Corynebacterium mycetoides)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

SDM12445.1

Membrane protein. (362 aa)

Predicted Functional Partners:

tatB

0.753

SDL67369.1

0.656

trpS

0.640

SDL69066.1

0.545

SDL64225.1

0.529

SDL77050.1

0.508

SDL90088.1

0.505

SDM13970.1

0.501

SDM00709.1

0.489

SDL89467.1

0.481

Your Current Organism:

Corynebacterium mycetoides

NCBI taxonomy Id: 38302
Other names: ATCC 43995, C. mycetoides, CCUG 27538, CIP 55.51, DSM 20632, IFO 15289, JCM 9388, NBRC 15289, NCTC 9864

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDL64225.1	SDL67369.1	SAMN04488535_0270	SAMN04488535_0372	Hypothetical protein.	Hypothetical protein.	0.693
SDL64225.1	SDL69066.1	SAMN04488535_0270	SAMN04488535_0430	Hypothetical protein.	Protein of unknown function.	0.766
SDL64225.1	SDL77050.1	SAMN04488535_0270	SAMN04488535_0727	Hypothetical protein.	Protein of unknown function.	0.774
SDL64225.1	SDL89467.1	SAMN04488535_0270	SAMN04488535_1156	Hypothetical protein.	Hypothetical protein.	0.773
SDL64225.1	SDL90088.1	SAMN04488535_0270	SAMN04488535_1179	Hypothetical protein.	Hypothetical protein.	0.774
SDL64225.1	SDM00709.1	SAMN04488535_0270	SAMN04488535_1544	Hypothetical protein.	Hypothetical protein.	0.600
SDL64225.1	SDM12445.1	SAMN04488535_0270	SAMN04488535_2012	Hypothetical protein.	Membrane protein.	0.529
SDL64225.1	SDM13970.1	SAMN04488535_0270	SAMN04488535_2073	Hypothetical protein.	Hypothetical protein.	0.750
SDL64225.1	tatB	SAMN04488535_0270	SAMN04488535_0296	Hypothetical protein.	Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.	0.725
SDL67369.1	SDL64225.1	SAMN04488535_0372	SAMN04488535_0270	Hypothetical protein.	Hypothetical protein.	0.693
SDL67369.1	SDL69066.1	SAMN04488535_0372	SAMN04488535_0430	Hypothetical protein.	Protein of unknown function.	0.725
SDL67369.1	SDL77050.1	SAMN04488535_0372	SAMN04488535_0727	Hypothetical protein.	Protein of unknown function.	0.713
SDL67369.1	SDL89467.1	SAMN04488535_0372	SAMN04488535_1156	Hypothetical protein.	Hypothetical protein.	0.717
SDL67369.1	SDL90088.1	SAMN04488535_0372	SAMN04488535_1179	Hypothetical protein.	Hypothetical protein.	0.713
SDL67369.1	SDM00709.1	SAMN04488535_0372	SAMN04488535_1544	Hypothetical protein.	Hypothetical protein.	0.753
SDL67369.1	SDM12445.1	SAMN04488535_0372	SAMN04488535_2012	Hypothetical protein.	Membrane protein.	0.656
SDL67369.1	SDM13970.1	SAMN04488535_0372	SAMN04488535_2073	Hypothetical protein.	Hypothetical protein.	0.576
SDL67369.1	tatB	SAMN04488535_0372	SAMN04488535_0296	Hypothetical protein.	Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.	0.632
SDL69066.1	SDL64225.1	SAMN04488535_0430	SAMN04488535_0270	Protein of unknown function.	Hypothetical protein.	0.766
SDL69066.1	SDL67369.1	SAMN04488535_0430	SAMN04488535_0372	Protein of unknown function.	Hypothetical protein.	0.725