STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720375_07857Unannotated protein. (406 aa)    
Predicted Functional Partners:
GCA_000720375_07511
Unannotated protein.
  
     0.709
GCA_000720375_04187
Unannotated protein.
  
     0.660
GCA_000720375_11218
Unannotated protein.
  
     0.646
GCA_000720375_02260
Unannotated protein.
     
 0.583
GCA_000720375_00959
Unannotated protein.
  
     0.571
GCA_000720375_01711
Unannotated protein.
  
     0.550
GCA_000720375_01664
Unannotated protein.
  
     0.541
GCA_000720375_04111
Unannotated protein.
  
     0.539
GCA_000720375_03043
Unannotated protein.
  
     0.536
GCA_000720375_09214
Unannotated protein.
  
     0.531
Your Current Organism:
Rhodococcus rhodnii
NCBI taxonomy Id: 38312
Other names: ATCC 35071, CIP 104181, DSM 43336, IEGM 555, JCM 3203, KCC A-0203, LMG 5363, LMG:5363, NBRC 100604, NCIB 11279, NCIB:11279, NCIMB 11279, NRRL B-16535, Nocardia rhodnii, R. rhodnii, strain N445
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.