STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720375_07955Unannotated protein. (217 aa)    
Predicted Functional Partners:
GCA_000720375_07953
Unannotated protein.
 
     0.889
GCA_000720375_07952
Unannotated protein.
 
     0.841
GCA_000720375_07951
Unannotated protein.
 
 
   0.834
GCA_000720375_07954
Unannotated protein.
 
     0.809
GCA_000720375_07950
Unannotated protein.
 
     0.663
GCA_000720375_05746
Unannotated protein.
  
     0.487
Rrhod_2619
Unannotated protein; Belongs to the P(II) protein family.
      
 0.474
GCA_000720375_00572
Unannotated protein.
  
     0.435
GCA_000720375_00040
Unannotated protein.
  
     0.424
GCA_000720375_07799
Unannotated protein.
  
     0.424
Your Current Organism:
Rhodococcus rhodnii
NCBI taxonomy Id: 38312
Other names: ATCC 35071, CIP 104181, DSM 43336, IEGM 555, JCM 3203, KCC A-0203, LMG 5363, LMG:5363, NBRC 100604, NCIB 11279, NCIB:11279, NCIMB 11279, NRRL B-16535, Nocardia rhodnii, R. rhodnii, strain N445
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.