STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720375_09619Unannotated protein. (119 aa)    
Predicted Functional Partners:
GCA_000720375_08692
Unannotated protein.
   
    0.826
GCA_000720375_09620
Unannotated protein.
       0.773
GCA_000720375_05870
Unannotated protein.
  
     0.725
GCA_000720375_09621
Unannotated protein.
       0.620
GCA_000720375_04414
Unannotated protein.
   
    0.529
GCA_000720375_10383
Unannotated protein.
   
    0.529
GCA_000720375_00140
Unannotated protein.
  
  
 0.508
GCA_000720375_09616
Unannotated protein.
       0.473
GCA_000720375_09617
Unannotated protein.
       0.473
GCA_000720375_09618
Unannotated protein.
       0.473
Your Current Organism:
Rhodococcus rhodnii
NCBI taxonomy Id: 38312
Other names: ATCC 35071, CIP 104181, DSM 43336, IEGM 555, JCM 3203, KCC A-0203, LMG 5363, LMG:5363, NBRC 100604, NCIB 11279, NCIB:11279, NCIMB 11279, NRRL B-16535, Nocardia rhodnii, R. rhodnii, strain N445
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.