STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpBSn-glycerol-3-phosphate-binding periplasmic protein precursor UgpB. (441 aa)    
Predicted Functional Partners:
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.999
ugpA
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
 0.999
ugpC
Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 0.994
CDO47243.1
Oxidoreductase.
     
 0.479
hisS
histidyl-tRNA synthetase.
     
 0.471
plsY
Hypothetical membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
      
 0.463
CDO46446.1
Sensor diguanylate cyclase/phosphodiesterase.
     
 0.456
glyQ
glycyl-tRNA synthetase subunit alpha.
      
 0.453
fruB
Multiphosphoryl transfer protein FruB.
     
 0.425
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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