Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aatA | ansA | BM1374165_01205 | BM1374165_00214 | Aspartate aminotransferase. | L-asparaginase. | 0.915 |
aatA | lysC | BM1374165_01205 | BM1374165_00382 | Aspartate aminotransferase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.898 |
aatA | pepA | BM1374165_01205 | BM1374165_00212 | Aspartate aminotransferase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.825 |
aatA | purA | BM1374165_01205 | BM1374165_00357 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.919 |
aatA | pyrB | BM1374165_01205 | BM1374165_00903 | Aspartate aminotransferase. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.908 |
ansA | aatA | BM1374165_00214 | BM1374165_01205 | L-asparaginase. | Aspartate aminotransferase. | 0.915 |
ansA | coaA | BM1374165_00214 | BM1374165_00213 | L-asparaginase. | Pantothenate kinase. | 0.509 |
ansA | gatA | BM1374165_00214 | BM1374165_00907 | L-asparaginase. | aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.415 |
ansA | hslU | BM1374165_00214 | BM1374165_00216 | L-asparaginase. | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.491 |
ansA | hslV | BM1374165_00214 | BM1374165_00215 | L-asparaginase. | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.546 |
ansA | lysC | BM1374165_00214 | BM1374165_00382 | L-asparaginase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.807 |
ansA | pepA | BM1374165_00214 | BM1374165_00212 | L-asparaginase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.479 |
ansA | purA | BM1374165_00214 | BM1374165_00357 | L-asparaginase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
ansA | pyrB | BM1374165_00214 | BM1374165_00903 | L-asparaginase. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.900 |
ansA | ribA | BM1374165_00214 | BM1374165_00412 | L-asparaginase. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.445 |
coaA | ansA | BM1374165_00213 | BM1374165_00214 | Pantothenate kinase. | L-asparaginase. | 0.509 |
coaA | hslU | BM1374165_00213 | BM1374165_00216 | Pantothenate kinase. | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.422 |
coaA | hslV | BM1374165_00213 | BM1374165_00215 | Pantothenate kinase. | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.422 |
coaA | pepA | BM1374165_00213 | BM1374165_00212 | Pantothenate kinase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.723 |
gatA | ansA | BM1374165_00907 | BM1374165_00214 | aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | L-asparaginase. | 0.415 |
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