STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO46269.1Cytochrome c. (183 aa)    
Predicted Functional Partners:
cyoB
Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 0.939
cyoA
Cytochrome o ubiquinol oxidase subunit II.
   
 0.922
CDO46447.1
Processing protease; Belongs to the peptidase M16 family.
  
 0.921
cyoC
Cytochrome o ubiquinol oxidase subunit III.
  
 0.887
etfA
Electron transfer flavoprotein alpha subunit.
   
 
  0.836
etfB
Electron transfer flavoprotein beta subunit.
   
 
  0.835
sdhC
Succinate dehydrogenase cytochrome b560 subunit.
  
 
 0.805
senC
Cytochrome-c oxidase assembly factor.
 
  
 0.791
tuf1_1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.786
tuf1_2
Elongation factor Tu.
  
 
 0.786
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.