Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO46269.1 | dppB_1 | BM1374165_00245 | BM1374165_00246 | Cytochrome c. | Peptide ABC transporter permease. | 0.546 |
CDO46269.1 | dppC_1 | BM1374165_00245 | BM1374165_00247 | Cytochrome c. | Peptide ABC transporter permease. | 0.546 |
CDO46269.1 | dppD_1 | BM1374165_00245 | BM1374165_00248 | Cytochrome c. | Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.546 |
CDO46269.1 | kdsB | BM1374165_00245 | BM1374165_00244 | Cytochrome c. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.597 |
CDO46269.1 | pheA | BM1374165_00245 | BM1374165_00243 | Cytochrome c. | Prephenate dehydratase. | 0.597 |
dppA_1 | dppB_1 | BM1374165_00958 | BM1374165_00246 | Peptide ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.927 |
dppA_1 | dppB_2 | BM1374165_00958 | BM1374165_01259 | Peptide ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.973 |
dppA_1 | dppC_1 | BM1374165_00958 | BM1374165_00247 | Peptide ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.832 |
dppA_1 | dppD_1 | BM1374165_00958 | BM1374165_00248 | Peptide ABC transporter substrate-binding protein. | Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.824 |
dppA_1 | dppD_2 | BM1374165_00958 | BM1374165_01257 | Peptide ABC transporter substrate-binding protein. | Dipeptide ABC transporter, ATP-binding protein. | 0.962 |
dppA_1 | dppF | BM1374165_00958 | BM1374165_01256 | Peptide ABC transporter substrate-binding protein. | Dipeptide ABC transporter, ATP-binding protein. | 0.900 |
dppB_1 | CDO46269.1 | BM1374165_00246 | BM1374165_00245 | Peptide ABC transporter permease. | Cytochrome c. | 0.546 |
dppB_1 | dppA_1 | BM1374165_00246 | BM1374165_00958 | Peptide ABC transporter permease. | Peptide ABC transporter substrate-binding protein. | 0.927 |
dppB_1 | dppC_1 | BM1374165_00246 | BM1374165_00247 | Peptide ABC transporter permease. | Peptide ABC transporter permease. | 0.979 |
dppB_1 | dppD_1 | BM1374165_00246 | BM1374165_00248 | Peptide ABC transporter permease. | Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.965 |
dppB_1 | dppD_2 | BM1374165_00246 | BM1374165_01257 | Peptide ABC transporter permease. | Dipeptide ABC transporter, ATP-binding protein. | 0.446 |
dppB_1 | kdsB | BM1374165_00246 | BM1374165_00244 | Peptide ABC transporter permease. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.435 |
dppB_1 | pheA | BM1374165_00246 | BM1374165_00243 | Peptide ABC transporter permease. | Prephenate dehydratase. | 0.435 |
dppB_2 | dppA_1 | BM1374165_01259 | BM1374165_00958 | Peptide ABC transporter permease. | Peptide ABC transporter substrate-binding protein. | 0.973 |
dppB_2 | dppC_1 | BM1374165_01259 | BM1374165_00247 | Peptide ABC transporter permease. | Peptide ABC transporter permease. | 0.472 |
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