STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppC_1Peptide ABC transporter permease. (380 aa)    
Predicted Functional Partners:
dppD_1
Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.994
dppB_1
Peptide ABC transporter permease.
  
 0.979
dppD_2
Dipeptide ABC transporter, ATP-binding protein.
   
 0.853
dppA_1
Peptide ABC transporter substrate-binding protein.
 
  
 0.832
dppF
Dipeptide ABC transporter, ATP-binding protein.
 
     0.650
CDO46269.1
Cytochrome c.
       0.546
dppB_2
Peptide ABC transporter permease.
   
 0.472
pheA
Prephenate dehydratase.
       0.435
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
       0.435
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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