STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
higB-1Toxin HigB-1. (104 aa)    
Predicted Functional Partners:
CDO46345.1
Virulence-associated protein.
 
 
 0.976
vapA_3
Virulence-associated protein A.
 
 
 
 0.579
vapA_2
Virulence-associated protein A.
 
 
 
 0.577
gp18
Phage protein Gp18.
       0.566
CDO46340.1
Phage portal protein.
       0.566
CDO46341.1
Putative phage related protein.
       0.566
gpA1
Phage terminase large subunit GpA1.
       0.566
CDO46343.1
Phage protein.
       0.566
CDO46663.1
Virulence-associated protein.
   
 
 0.510
vapA_5
Virulence-associated protein A.
   
 
 0.510
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.