STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO46385.1Sensory box histidine kinase. (437 aa)    
Predicted Functional Partners:
divK_1
Two component response regulator.
 0.999
divK_2
Two component response regulator.
 
 0.997
CDO47015.1
Sensor histidine kinase.
 
 
0.996
CDO46481.1
Two-component sensor histidine kinase.
 
 
0.965
CDO47413.1
Two-component response regulator.
  
 
 0.933
ompR
Transcriptional regulator OmpR.
 
 0.924
feuP
Two-component system regulatory protein.
 
 0.882
ctrA
Cell cycle transcriptional regulator CtrA.
 
 0.879
batR
Transcriptional regulator BatR.
 
 0.860
CDO46446.1
Sensor diguanylate cyclase/phosphodiesterase.
 
 
 0.846
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.