Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO46484.1 | CDO46503.1 | BM1374165_00464 | BM1374165_00483 | Phage SPO1 DNA polymerase-related protein. | uracil-DNA glycosylase family protein. | 0.908 |
CDO46484.1 | def | BM1374165_00464 | BM1374165_00077 | Phage SPO1 DNA polymerase-related protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.733 |
CDO46484.1 | filA | BM1374165_00464 | BM1374165_00171 | Phage SPO1 DNA polymerase-related protein. | filament-A percursor. | 0.528 |
CDO46484.1 | gmk | BM1374165_00464 | BM1374165_00520 | Phage SPO1 DNA polymerase-related protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.652 |
CDO46484.1 | gpmA | BM1374165_00464 | BM1374165_01285 | Phage SPO1 DNA polymerase-related protein. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.477 |
CDO46484.1 | pepN | BM1374165_00464 | BM1374165_00463 | Phage SPO1 DNA polymerase-related protein. | Aminopeptidase N. | 0.563 |
CDO46484.1 | ssb2_1 | BM1374165_00464 | BM1374165_00335 | Phage SPO1 DNA polymerase-related protein. | Single-strand binding protein. | 0.461 |
CDO46484.1 | ssb2_2 | BM1374165_00464 | BM1374165_00680 | Phage SPO1 DNA polymerase-related protein. | Single-strand binding protein. | 0.461 |
CDO46484.1 | ssb2_3 | BM1374165_00464 | BM1374165_00785 | Phage SPO1 DNA polymerase-related protein. | Single-strand binding protein. | 0.461 |
CDO46484.1 | ssb2_4 | BM1374165_00464 | BM1374165_00997 | Phage SPO1 DNA polymerase-related protein. | Single-strand binding protein. | 0.461 |
CDO46503.1 | CDO46484.1 | BM1374165_00483 | BM1374165_00464 | uracil-DNA glycosylase family protein. | Phage SPO1 DNA polymerase-related protein. | 0.908 |
CDO46503.1 | ssb2_1 | BM1374165_00483 | BM1374165_00335 | uracil-DNA glycosylase family protein. | Single-strand binding protein. | 0.431 |
CDO46503.1 | ssb2_2 | BM1374165_00483 | BM1374165_00680 | uracil-DNA glycosylase family protein. | Single-strand binding protein. | 0.431 |
CDO46503.1 | ssb2_3 | BM1374165_00483 | BM1374165_00785 | uracil-DNA glycosylase family protein. | Single-strand binding protein. | 0.431 |
CDO46503.1 | ssb2_4 | BM1374165_00483 | BM1374165_00997 | uracil-DNA glycosylase family protein. | Single-strand binding protein. | 0.431 |
def | CDO46484.1 | BM1374165_00077 | BM1374165_00464 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Phage SPO1 DNA polymerase-related protein. | 0.733 |
filA | CDO46484.1 | BM1374165_00171 | BM1374165_00464 | filament-A percursor. | Phage SPO1 DNA polymerase-related protein. | 0.528 |
filA | gpmA | BM1374165_00171 | BM1374165_01285 | filament-A percursor. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.634 |
gmk | CDO46484.1 | BM1374165_00520 | BM1374165_00464 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Phage SPO1 DNA polymerase-related protein. | 0.652 |
gpmA | CDO46484.1 | BM1374165_01285 | BM1374165_00464 | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | Phage SPO1 DNA polymerase-related protein. | 0.477 |
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