Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO46497.1 | hmuR | BM1374165_00477 | BM1374165_00478 | Hypothetical protein. | Outer membrane hemin receptor. | 0.598 |
CDO46497.1 | hmuS | BM1374165_00477 | BM1374165_00476 | Hypothetical protein. | Hemin degrading protein. | 0.553 |
CDO46497.1 | hmuT | BM1374165_00477 | BM1374165_00475 | Hypothetical protein. | Hemin ABC transporter, periplasmic hemin-binding protein. | 0.529 |
CDO46497.1 | hmuU | BM1374165_00477 | BM1374165_00474 | Hypothetical protein. | Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.529 |
CDO46497.1 | hmuV | BM1374165_00477 | BM1374165_00473 | Hypothetical protein. | Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. | 0.529 |
CDO47413.1 | hmuR | BM1374165_01437 | BM1374165_00478 | Two-component response regulator. | Outer membrane hemin receptor. | 0.473 |
hmuR | CDO46497.1 | BM1374165_00478 | BM1374165_00477 | Outer membrane hemin receptor. | Hypothetical protein. | 0.598 |
hmuR | CDO47413.1 | BM1374165_00478 | BM1374165_01437 | Outer membrane hemin receptor. | Two-component response regulator. | 0.473 |
hmuR | hmuS | BM1374165_00478 | BM1374165_00476 | Outer membrane hemin receptor. | Hemin degrading protein. | 0.850 |
hmuR | hmuT | BM1374165_00478 | BM1374165_00475 | Outer membrane hemin receptor. | Hemin ABC transporter, periplasmic hemin-binding protein. | 0.838 |
hmuR | hmuU | BM1374165_00478 | BM1374165_00474 | Outer membrane hemin receptor. | Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.798 |
hmuR | hmuV | BM1374165_00478 | BM1374165_00473 | Outer membrane hemin receptor. | Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. | 0.801 |
hmuR | macB | BM1374165_00478 | BM1374165_01604 | Outer membrane hemin receptor. | ABC transporter ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.490 |
hmuR | rirA | BM1374165_00478 | BM1374165_00569 | Outer membrane hemin receptor. | Iron-responsive transcriptional regulator. | 0.718 |
hmuR | tolA | BM1374165_00478 | BM1374165_01534 | Outer membrane hemin receptor. | TolA protein. | 0.896 |
hmuR | tonB | BM1374165_00478 | BM1374165_00479 | Outer membrane hemin receptor. | TonB protein. | 0.941 |
hmuS | CDO46497.1 | BM1374165_00476 | BM1374165_00477 | Hemin degrading protein. | Hypothetical protein. | 0.553 |
hmuS | hmuR | BM1374165_00476 | BM1374165_00478 | Hemin degrading protein. | Outer membrane hemin receptor. | 0.850 |
hmuS | hmuT | BM1374165_00476 | BM1374165_00475 | Hemin degrading protein. | Hemin ABC transporter, periplasmic hemin-binding protein. | 0.998 |
hmuS | hmuU | BM1374165_00476 | BM1374165_00474 | Hemin degrading protein. | Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.981 |
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