STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntrXNitrogen regulation protein NtrX. (452 aa)    
Predicted Functional Partners:
ntrY
Nitrogen regulation protein NtrY.
 0.999
trkA
Potassium transporter peripheral membrane component.
      0.938
CDO47015.1
Sensor histidine kinase.
 
 0.755
CDO46593.1
Hypothetical protein.
       0.752
CDO47276.1
Glutathione S-transferase.
 
    
 0.744
CDO46594.1
Hypothetical protein.
       0.730
yfeA
Iron transport protein YfeA; Belongs to the bacterial solute-binding protein 9 family.
      
 0.720
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.720
pdhA
Pyruvate dehydrogenase subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
      
 0.710
tldD
TldD protein.
      
 0.649
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.