Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO46269.1 | CDO46399.1 | BM1374165_00245 | BM1374165_00378 | Cytochrome c. | Methyltransferase. | 0.549 |
CDO46269.1 | CDO46602.1 | BM1374165_00245 | BM1374165_00583 | Cytochrome c. | NADH dehydrogenase. | 0.535 |
CDO46269.1 | CDO47006.1 | BM1374165_00245 | BM1374165_01002 | Cytochrome c. | NADH-ubiquinone oxidoreductase. | 0.642 |
CDO46269.1 | CDO47214.1 | BM1374165_00245 | BM1374165_01220 | Cytochrome c. | Hypothetical protein. | 0.418 |
CDO46399.1 | CDO46269.1 | BM1374165_00378 | BM1374165_00245 | Methyltransferase. | Cytochrome c. | 0.549 |
CDO46399.1 | CDO46602.1 | BM1374165_00378 | BM1374165_00583 | Methyltransferase. | NADH dehydrogenase. | 0.593 |
CDO46399.1 | CDO47006.1 | BM1374165_00378 | BM1374165_01002 | Methyltransferase. | NADH-ubiquinone oxidoreductase. | 0.645 |
CDO46399.1 | CDO47214.1 | BM1374165_00378 | BM1374165_01220 | Methyltransferase. | Hypothetical protein. | 0.750 |
CDO46602.1 | CDO46269.1 | BM1374165_00583 | BM1374165_00245 | NADH dehydrogenase. | Cytochrome c. | 0.535 |
CDO46602.1 | CDO46399.1 | BM1374165_00583 | BM1374165_00378 | NADH dehydrogenase. | Methyltransferase. | 0.593 |
CDO46602.1 | CDO46603.1 | BM1374165_00583 | BM1374165_00584 | NADH dehydrogenase. | Hypothetical protein. | 0.748 |
CDO46602.1 | CDO47006.1 | BM1374165_00583 | BM1374165_01002 | NADH dehydrogenase. | NADH-ubiquinone oxidoreductase. | 0.707 |
CDO46602.1 | CDO47214.1 | BM1374165_00583 | BM1374165_01220 | NADH dehydrogenase. | Hypothetical protein. | 0.485 |
CDO46602.1 | gatB | BM1374165_00583 | BM1374165_00582 | NADH dehydrogenase. | aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.506 |
CDO46603.1 | CDO46602.1 | BM1374165_00584 | BM1374165_00583 | Hypothetical protein. | NADH dehydrogenase. | 0.748 |
CDO47006.1 | CDO46269.1 | BM1374165_01002 | BM1374165_00245 | NADH-ubiquinone oxidoreductase. | Cytochrome c. | 0.642 |
CDO47006.1 | CDO46399.1 | BM1374165_01002 | BM1374165_00378 | NADH-ubiquinone oxidoreductase. | Methyltransferase. | 0.645 |
CDO47006.1 | CDO46602.1 | BM1374165_01002 | BM1374165_00583 | NADH-ubiquinone oxidoreductase. | NADH dehydrogenase. | 0.707 |
CDO47214.1 | CDO46269.1 | BM1374165_01220 | BM1374165_00245 | Hypothetical protein. | Cytochrome c. | 0.418 |
CDO47214.1 | CDO46399.1 | BM1374165_01220 | BM1374165_00378 | Hypothetical protein. | Methyltransferase. | 0.750 |
page 1 of 2