STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapA_2Virulence-associated protein A. (99 aa)    
Predicted Functional Partners:
CDO46675.1
Proteic killer suppression protein.
   
   0.841
CDO46663.1
Virulence-associated protein.
  
     0.721
korA
KorA protein.
      
 0.649
higB-1
Toxin HigB-1.
 
 
 
 0.577
CDO46359.1
Proteic killer suppression protein.
    
   0.461
CDO46664.1
Plasmid maintenance system killer protein.
    
   0.461
CDO46777.1
Proteic killer suppression protein.
    
   0.461
CDO47003.1
Proteic killer suppression protein.
    
   0.461
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.