STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO46819.1Putative FeS assembly scaffold SufA. (125 aa)    
Predicted Functional Partners:
sufB
Cysteine desulfurase activator complex subunit SufB.
  
 
 0.795
nifS1
Nitrogenase cofactor synthesis protein NifS1.
 
  
 0.746
nifU
Nitrogen fixation protein.
 
 
 0.682
CDO46749.1
Nitrogen-fixing NifU-like protein.
  
  
 0.660
CDO46847.1
Nitrogen-fixing NifU-like protein.
  
  
 0.660
CDO46516.1
Aminomethyltransferase.
 
 
 0.659
sufC
FeS assembly ATPase SufC.
  
 
 0.651
CDO47027.1
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.620
sufD
FeS assembly protein SufD.
  
 
 0.618
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.486
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.