STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO46847.1Nitrogen-fixing NifU-like protein. (142 aa)    
Predicted Functional Partners:
nifS1
Nitrogenase cofactor synthesis protein NifS1.
  
 0.984
nifS2
Nitrogenase cofactor synthesis protein NifS2; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.952
sufC
FeS assembly ATPase SufC.
  
  
 0.802
yidD_2
Putative membrane protein insertion efficiency factor.
       0.780
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.778
CDO46515.1
Hypothetical protein.
  
     0.698
thrS_2
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.681
CDO46951.1
Hypothetical protein.
 
    0.681
hisS
histidyl-tRNA synthetase.
 
    0.674
sufB
Cysteine desulfurase activator complex subunit SufB.
  
  
 0.668
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.