Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aatA | purA | BM1374165_01205 | BM1374165_00357 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.919 |
aatA | pyrB | BM1374165_01205 | BM1374165_00903 | Aspartate aminotransferase. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.908 |
carA | carB | BM1374165_01200 | BM1374165_01203 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
carA | pyrB | BM1374165_01200 | BM1374165_00903 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carA | pyrC1 | BM1374165_01200 | BM1374165_00497 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.979 |
carA | pyrC2 | BM1374165_01200 | BM1374165_00902 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.971 |
carA | pyrD | BM1374165_01200 | BM1374165_00365 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.936 |
carA | pyrE | BM1374165_01200 | BM1374165_00486 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.913 |
carA | pyrF | BM1374165_01200 | BM1374165_01421 | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.932 |
carB | carA | BM1374165_01203 | BM1374165_01200 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.999 |
carB | purA | BM1374165_01203 | BM1374165_00357 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.612 |
carB | pyrB | BM1374165_01203 | BM1374165_00903 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carB | pyrC1 | BM1374165_01203 | BM1374165_00497 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Dihydroorotase. | 0.981 |
carB | pyrC2 | BM1374165_01203 | BM1374165_00902 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Dihydroorotase. | 0.966 |
carB | pyrD | BM1374165_01203 | BM1374165_00365 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.948 |
carB | pyrE | BM1374165_01203 | BM1374165_00486 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.941 |
carB | pyrF | BM1374165_01203 | BM1374165_01421 | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.979 |
dprA | pyrB | BM1374165_00900 | BM1374165_00903 | DNA processing chain A. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.918 |
dprA | pyrC2 | BM1374165_00900 | BM1374165_00902 | DNA processing chain A. | Dihydroorotase. | 0.760 |
purA | aatA | BM1374165_00357 | BM1374165_01205 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | Aspartate aminotransferase. | 0.919 |
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