Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO46721.1 | dgt | BM1374165_00708 | BM1374165_01043 | Putative FeS assembly scaffold SufA; Belongs to the HesB/IscA family. | Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily. | 0.768 |
CDO46721.1 | nspC | BM1374165_00708 | BM1374165_01703 | Putative FeS assembly scaffold SufA; Belongs to the HesB/IscA family. | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.740 |
CDO47044.1 | CDO47045.1 | BM1374165_01041 | BM1374165_01042 | Hypothetical protein. | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | 0.757 |
CDO47044.1 | CDO47048.1 | BM1374165_01041 | BM1374165_01045 | Hypothetical protein. | Hypothetical membrane protein. | 0.835 |
CDO47044.1 | argS | BM1374165_01041 | BM1374165_01044 | Hypothetical protein. | arginyl-tRNA synthetase. | 0.468 |
CDO47044.1 | ccdA | BM1374165_01041 | BM1374165_01040 | Hypothetical protein. | Cytochrome c-type biogenesis protein, transmembrane region. | 0.628 |
CDO47044.1 | dgt | BM1374165_01041 | BM1374165_01043 | Hypothetical protein. | Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily. | 0.531 |
CDO47044.1 | glmU | BM1374165_01041 | BM1374165_01039 | Hypothetical protein. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.600 |
CDO47045.1 | CDO47044.1 | BM1374165_01042 | BM1374165_01041 | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | Hypothetical protein. | 0.757 |
CDO47045.1 | argS | BM1374165_01042 | BM1374165_01044 | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | arginyl-tRNA synthetase. | 0.557 |
CDO47045.1 | ccdA | BM1374165_01042 | BM1374165_01040 | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | Cytochrome c-type biogenesis protein, transmembrane region. | 0.615 |
CDO47045.1 | dgt | BM1374165_01042 | BM1374165_01043 | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily. | 0.646 |
CDO47045.1 | glmU | BM1374165_01042 | BM1374165_01039 | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.590 |
CDO47048.1 | CDO47044.1 | BM1374165_01045 | BM1374165_01041 | Hypothetical membrane protein. | Hypothetical protein. | 0.835 |
CDO47048.1 | argS | BM1374165_01045 | BM1374165_01044 | Hypothetical membrane protein. | arginyl-tRNA synthetase. | 0.543 |
CDO47048.1 | dgt | BM1374165_01045 | BM1374165_01043 | Hypothetical membrane protein. | Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily. | 0.488 |
argS | CDO47044.1 | BM1374165_01044 | BM1374165_01041 | arginyl-tRNA synthetase. | Hypothetical protein. | 0.468 |
argS | CDO47045.1 | BM1374165_01044 | BM1374165_01042 | arginyl-tRNA synthetase. | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | 0.557 |
argS | CDO47048.1 | BM1374165_01044 | BM1374165_01045 | arginyl-tRNA synthetase. | Hypothetical membrane protein. | 0.543 |
argS | dgt | BM1374165_01044 | BM1374165_01043 | arginyl-tRNA synthetase. | Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily. | 0.721 |
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