STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO47322.1SH3-domain protein. (208 aa)    
Predicted Functional Partners:
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.774
CDO47192.1
Transglycosylase-associated protein.
  
     0.737
CDO46076.1
Hypothetical protein.
  
     0.691
CDO47414.1
Sensory transduction histidine kinase.
  
     0.654
lpcC
Lipopolysaccharide core biosynthesis mannosyltransferase LpcC.
  
     0.582
CDO47413.1
Two-component response regulator.
  
     0.541
sigH
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.507
CDO47223.1
Hypothetical protein.
  
     0.499
CDO47444.1
Hypothetical membrane protein.
  
     0.467
CDO46075.1
Putative outer membrane protein.
  
     0.405
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.