Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO47325.1 | metN | BM1374165_01342 | BM1374165_01341 | ABC transporter permease. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
CDO47325.1 | yaeC | BM1374165_01342 | BM1374165_01340 | ABC transporter permease. | Lipoprotein; Belongs to the nlpA lipoprotein family. | 0.999 |
metK | metN | BM1374165_00228 | BM1374165_01341 | S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.619 |
metK | yaeC | BM1374165_00228 | BM1374165_01340 | S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family. | Lipoprotein; Belongs to the nlpA lipoprotein family. | 0.416 |
metN | CDO47325.1 | BM1374165_01341 | BM1374165_01342 | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | ABC transporter permease. | 0.999 |
metN | metK | BM1374165_01341 | BM1374165_00228 | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family. | 0.619 |
metN | yaeC | BM1374165_01341 | BM1374165_01340 | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Lipoprotein; Belongs to the nlpA lipoprotein family. | 0.999 |
yaeC | CDO47325.1 | BM1374165_01340 | BM1374165_01342 | Lipoprotein; Belongs to the nlpA lipoprotein family. | ABC transporter permease. | 0.999 |
yaeC | metK | BM1374165_01340 | BM1374165_00228 | Lipoprotein; Belongs to the nlpA lipoprotein family. | S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family. | 0.416 |
yaeC | metN | BM1374165_01340 | BM1374165_01341 | Lipoprotein; Belongs to the nlpA lipoprotein family. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |