STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
surFSurF1 family protein (surfeit 1). (261 aa)    
Predicted Functional Partners:
ctaA
Cytochrome c oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
 
 
 0.850
CDO46831.1
Cytochrome c oxidase assembly protein.
 
 
 0.850
cyoA
Cytochrome o ubiquinol oxidase subunit II.
 
 
 0.810
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.775
cyoB
Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.766
CDO46269.1
Cytochrome c.
  
  
 0.760
cyoC
Cytochrome o ubiquinol oxidase subunit III.
 
  
 0.705
cyoD
Cytochrome o ubiquinol oxidase subunit IV.
 
     0.638
senC
Cytochrome-c oxidase assembly factor.
 
  
 0.606
CDO46447.1
Processing protease; Belongs to the peptidase M16 family.
   
 
 0.566
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.