STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO47625.1Hypothetical protein. (568 aa)    
Predicted Functional Partners:
sun2
SUN-family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
    0.729
CDO47236.1
Hypothetical protein.
  
     0.665
CDO47628.1
Hypothetical protein.
 
     0.629
addB
Double-strand break repair protein AddB.
  
     0.592
batS
Two-component sensor histidine kinase BatS.
  
     0.588
CDO47544.1
ATP-dependent helicase (fragment).
  
     0.582
CDO46044.1
Hypothetical protein.
  
     0.562
CDO47636.1
Hypothetical DNA-binding protein.
  
     0.538
CDO46134.1
Putative translocase transmembrane protein.
  
     0.530
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
       0.528
Your Current Organism:
Bartonella henselae
NCBI taxonomy Id: 38323
Other names: ATCC 49882, ATCC:49882D-5, B. henselae, CCUG 30454, CIP 103737, Rochalimaea henselae, strain G5436, strain Houston-1
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