STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rcas_0760PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4415 glycosyl transferase, family 2. (343 aa)    
Predicted Functional Partners:
Rcas_0755
KEGG: pth:PTH_0126 predicted integral membrane protein.
 
    0.840
Rcas_0758
PFAM: glycosyl transferase group 1; KEGG: mem:Memar_0202 glycosyl transferase, group 1.
 
    0.826
Rcas_0753
KEGG: rrs:RoseRS_4411 membrane protein-like protein.
 
     0.805
Rcas_0759
Hypothetical protein; KEGG: sco:SCO4733 integral membrane protein.
  
    0.776
Rcas_0756
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO2317 methyltransferase.
       0.775
Rcas_0757
PFAM: glycosyl transferase family 2; KEGG: rxy:Rxyl_3118 glycosyl transferase, family 2.
  
    0.775
Rcas_0754
KEGG: stp:Strop_1125 hypothetical protein.
  
  
 0.774
Rcas_0761
KEGG: rrs:RoseRS_4416 hypothetical protein.
   
   0.473
Rcas_1348
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2.
  
  
 0.470
Rcas_3971
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_1131 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.405
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.