STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rcas_0808PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1443 UbiE/COQ5 methyltransferase. (182 aa)    
Predicted Functional Partners:
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
  
  0.911
Rcas_1178
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0807 methyltransferase type 11.
  
  
 
0.910
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.908
Rcas_0643
KEGG: rrs:RoseRS_0566 multimeric flavodoxin WrbA-like protein.
     
  0.900
Rcas_3189
PFAM: MCP methyltransferase CheR-type; Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll3672 methyl transferase-like protein.
  
     0.704
Rcas_3324
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3984 methyltransferase type 11.
  
     0.505
Rcas_3055
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2423 methyltransferase type 11.
  
     0.494
Rcas_2312
Methyltransferase type 11; PFAM: putative RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1224 methyltransferase type 11.
  
     0.422
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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