STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rcas_1572PFAM: electron transport protein SCO1/SenC; KEGG: rrs:RoseRS_0931 electron transport protein SCO1/SenC. (250 aa)    
Predicted Functional Partners:
Rcas_1574
Cytochrome c oxidase subunit II; PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: rrs:RoseRS_0933 cytochrome c oxidase, subunit II.
 
 
 0.954
Rcas_3558
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.923
Rcas_3573
KEGG: rrs:RoseRS_1366 hypothetical protein.
 
 
 0.830
Rcas_1575
PFAM: cytochrome c oxidase subunit I; KEGG: rrs:RoseRS_0934 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.778
Rcas_2445
Hypothetical protein.
  
 
 0.753
Rcas_4444
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0760 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
 
0.752
Rcas_0176
KEGG: rrs:RoseRS_4581 hypothetical protein.
  
 
 0.731
Rcas_0437
KEGG: rrs:RoseRS_4206 hypothetical protein.
  
 
 0.648
Rcas_3619
TIGRFAM: redox-active disulfide protein 2; KEGG: rrs:RoseRS_1708 redox-active disulfide protein 2.
  
 
 0.648
Rcas_1462
KEGG: rrs:RoseRS_4139 hypothetical protein.
 
  
 0.610
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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