Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rcas_2162PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1463 von Willebrand factor, type A. (425 aa)    
Predicted Functional Partners:
Rcas_2164
PFAM: protein kinase; Pyrrolo-quinoline quinone; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1465 protein kinase.
 
    0.707
Rcas_2161
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1462 FHA domain containing protein.
 
     0.699
Rcas_2163
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_1464 protein phosphatase 2C domain protein.
 
     0.657
Rcas_2575
PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2796 von Willebrand factor, type A.
 
    0.654
Rcas_3821
PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1891 von Willebrand factor, type A.
  
     0.589
Rcas_2160
KEGG: rrs:RoseRS_1461 hypothetical protein.
       0.540
Rcas_0032
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0774 TPR repeat-containing protein.
 
     0.510
Rcas_3060
KEGG: rrs:RoseRS_2418 hypothetical protein.
 
     0.498
Rcas_3820
TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1890 hypothetical protein.
 
    0.491
Rcas_3816
KEGG: rrs:RoseRS_1886 hypothetical protein.
  
     0.484
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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