Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rcas_3257 | Rcas_3259 | Rcas_3257 | Rcas_3259 | PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106. | PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. | 0.621 |
Rcas_3257 | acpP | Rcas_3257 | Rcas_3256 | PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.502 |
Rcas_3257 | tatC | Rcas_3257 | Rcas_3258 | PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.992 |
Rcas_3259 | Rcas_3257 | Rcas_3259 | Rcas_3257 | PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. | PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106. | 0.621 |
Rcas_3259 | acpP | Rcas_3259 | Rcas_3256 | PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.406 |
Rcas_3259 | tatC | Rcas_3259 | Rcas_3258 | PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.642 |
acpP | Rcas_3257 | Rcas_3256 | Rcas_3257 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106. | 0.502 |
acpP | Rcas_3259 | Rcas_3256 | Rcas_3259 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. | 0.406 |
acpP | tatC | Rcas_3256 | Rcas_3258 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.545 |
tatC | Rcas_3257 | Rcas_3258 | Rcas_3257 | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106. | 0.992 |
tatC | Rcas_3259 | Rcas_3258 | Rcas_3259 | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. | 0.642 |
tatC | acpP | Rcas_3258 | Rcas_3256 | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.545 |