STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rcas_4345Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (254 aa)    
Predicted Functional Partners:
Rcas_4453
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.998
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.961
Rcas_1607
KEGG: rrs:RoseRS_1734 SMC domain protein.
  
 
 0.839
Rcas_2743
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2675 hypothetical protein.
  
 
 0.839
Rcas_1085
KEGG: rrs:RoseRS_3796 hypothetical protein.
  
 
 0.836
Rcas_1650
KEGG: rrs:RoseRS_1294 hypothetical protein.
  
 
 0.836
Rcas_2921
KEGG: rrs:RoseRS_3193 hypothetical protein.
  
 
 0.833
Rcas_4346
KEGG: rrs:RoseRS_0193 hypothetical protein.
       0.782
cmk
KEGG: rrs:RoseRS_0324 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
 
  
 0.772
Rcas_4347
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rrs:RoseRS_0192 transcriptional coactivator/pterin dehydratase.
       0.678
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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