STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_00390Capsid assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
EH30_14010
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.760
EH30_01310
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.739
EH30_05260
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.718
EH30_06725
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.707
EH30_06755
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.680
EH30_06760
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.677
EH30_06750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.672
EH30_06735
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.611
EH30_06775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.605
EH30_06730
FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.