STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_02325GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)    
Predicted Functional Partners:
EH30_02330
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.748
EH30_02320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
EH30_02310
Polynucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
EH30_07685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
EH30_06205
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.639
EH30_02315
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.602
EH30_03665
Septation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
EH30_08150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.556
EH30_14750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
EH30_07445
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.