STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_0306016S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
EH30_03055
Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
EH30_07045
Ribonucleotide-diphosphate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.761
EH30_03070
4-hydroxybenzoate polyprenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.751
EH30_03075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
EH30_03050
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
EH30_03065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
EH30_05925
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.493
EH30_01840
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.453
EH30_02775
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.439
EH30_08760
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.436
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.