STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_06755Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)    
Predicted Functional Partners:
EH30_06760
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
EH30_06750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
EH30_06740
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
EH30_12700
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.920
EH30_06725
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
EH30_06730
FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
EH30_06735
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
EH30_06720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.905
EH30_05260
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.897
EH30_06745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.884
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.