STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_07065NAD-dependent DNA ligase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. (685 aa)    
Predicted Functional Partners:
EH30_15205
ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.946
EH30_14115
leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.933
EH30_07075
DNA recombination protein RecN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.854
EH30_07070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
EH30_07560
DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.764
EH30_02625
Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.739
EH30_07055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.730
EH30_07060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.708
EH30_07200
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.671
EH30_14105
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.671
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.